STRINGSTRING
C497_11782 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_11782" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_11782Hypothetical protein (481 aa)    
Predicted Functional Partners:
C497_11787
Hypothetical protein (58 aa)
              0.611
C497_09798
Heat shock protein Hsp20 (125 aa)
 
     
  0.514
C497_17692
Signal-transducing histidine kinase-like protein (358 aa)
   
 
  0.513
HacjB3_14730
Transcription factor CBF/NF-Y/histone domain-containing protein (147 aa)
     
 
  0.481
C497_13166
Hypothetical protein (492 aa)
   
        0.470
C497_05452
MarR family transcriptional regulator (145 aa)
         
  0.461
C497_03985
Hypothetical protein (185 aa)
         
  0.461
C497_11008
Phosphoesterase RecJ domain-containing protein (494 aa)
   
        0.458
infB
Translation initiation factor IF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 (570 aa)
   
        0.458
truB
H/ACA RNA-protein complex component Cbf5p; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs (289 aa)
   
   
  0.418
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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