STRINGSTRING
C497_11777 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_11777" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_11777Hypothetical protein (475 aa)    
Predicted Functional Partners:
C497_11757
Hypothetical protein (197 aa)
 
          0.798
C497_11747
Type IV pilus biogenesis complex membrane subunit (669 aa)
 
          0.665
C497_14782
Hypothetical protein (208 aa)
   
          0.652
C497_05437
Hypothetical protein (201 aa)
   
          0.628
HacjB3_08140
Hypothetical protein (204 aa)
   
          0.625
C497_08029
Hypothetical protein (114 aa)
 
          0.616
HacjB3_10890
Hypothetical protein (37 aa)
              0.598
C497_10298
Bacterio-opsin activator HTH domain-containing protein (214 aa)
   
          0.575
C497_11742
Type II secretion system protein E (769 aa)
 
          0.556
HacjB3_05765
Hypothetical protein (217 aa)
   
          0.548
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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