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C497_11712 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_11712" - TRAP transporter, 4TM/12TM fusion protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_11712TRAP transporter, 4TM/12TM fusion protein (663 aa)    
Predicted Functional Partners:
C497_11722
Hypothetical protein (320 aa)
     
  0.985
C497_11717
Hypothetical protein (163 aa)
   
        0.919
HacjB3_00515
TRAP transporter solute receptor, TAXI family protein (353 aa)
     
  0.826
pheT
phenylalanyl-tRNA synthetase subunit beta (567 aa)
              0.593
pheS
phenylalanyl-tRNA synthetase subunit alpha (499 aa)
              0.593
thrS
threonyl-tRNA synthetase (640 aa)
              0.553
C497_11688
Hypothetical protein (77 aa)
              0.472
C497_18822
Hypothetical protein (173 aa)
   
        0.454
C497_11732
Twin-arginine translocation protein, TatA/E family subunit (111 aa)
              0.422
C497_11683
Glutathione S-transferase (326 aa)
              0.419
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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