STRINGSTRING
C497_11398 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_11398" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_11398Hypothetical protein (254 aa)    
Predicted Functional Partners:
C497_11403
Hypothetical protein (128 aa)
              0.719
C497_15618
Zinc finger SWIM domain-containing protein (116 aa)
   
          0.639
HacjB3_11265
acetate/CoA ligase (646 aa)
              0.626
C497_02842
Hypothetical protein (247 aa)
   
          0.591
rnp4
RNAse P, Rpr2/Rpp21 subunit; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5’-ends (92 aa)
              0.579
C497_05437
Hypothetical protein (201 aa)
   
          0.579
C497_15012
Hypothetical protein (150 aa)
   
          0.565
C497_14782
Hypothetical protein (208 aa)
   
          0.558
C497_09923
Hypothetical protein (221 aa)
   
          0.540
C497_17537
Helicase (151 aa)
   
          0.528
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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