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C497_11263 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_11263" - Polyketide cyclase/dehydrase in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_11263Polyketide cyclase/dehydrase (145 aa)    
Predicted Functional Partners:
C497_11268
Nitrilase (269 aa)
              0.877
C497_11258
Hypothetical protein (74 aa)
              0.829
HacjB3_11395
Hypothetical protein (55 aa)
              0.593
C497_11248
Glutamate dehydrogenase (418 aa)
              0.420
C497_12012
Glycerol-3-phosphate dehydrogenase, anaerobic subunit A (585 aa)
              0.416
HacjB3_00720
Glycerol-3-phosphate dehydrogenase (408 aa)
              0.416
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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