STRINGSTRING
HacjB3_11440 protein (Halalkalicoccus jeotgali) - STRING interaction network
"HacjB3_11440" - Pectin degradation protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HacjB3_11440Pectin degradation protein (146 aa)    
Predicted Functional Partners:
fbp
Fructose-1,6-bisphosphatase (285 aa)
 
          0.699
C497_11198
Fructose-bisphosphate aldolase (270 aa)
              0.694
C497_11188
Hypothetical protein (92 aa)
              0.458
C497_11193
3-hydroxyacyl-CoA dehydrogenase (285 aa)
              0.458
C497_09388
Aldo/keto reductase (362 aa)
              0.446
C497_09318
Aldo/keto reductase (274 aa)
              0.446
C497_08799
Aldo/keto reductase (269 aa)
              0.446
C497_08084
Aldo/keto reductase (255 aa)
              0.446
C497_07939
Aldo/keto reductase (327 aa)
              0.446
C497_11098
Oxidoreductase (337 aa)
              0.446
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
Server load: low (7%) [HD]