STRINGSTRING
C497_11183 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_11183" - Farnesyl-diphosphate farnesyltransferase in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_11183Farnesyl-diphosphate farnesyltransferase (355 aa)    
Predicted Functional Partners:
C497_10738
Polyprenyl synthetase (354 aa)
   
  0.945
C497_14002
Dimethylallyltranstransferase (347 aa)
   
  0.945
C497_17477
Polyprenyl synthetase (280 aa)
   
  0.945
C497_11178
acyl-CoA dehydrogenase (380 aa)
   
 
    0.893
C497_17132
Type 11 methyltransferase (199 aa)
   
 
  0.885
C497_10963
NADH dehydrogenase-like complex subunit CD (555 aa)
     
 
  0.880
C497_16212
Hypothetical protein (205 aa)
   
 
  0.867
C497_04657
3-beta hydroxysteroid dehydrogenase/isomerase family protein (233 aa)
 
 
  0.867
C497_10468
SAM-dependent methyltransferase (272 aa)
   
 
  0.859
C497_12227
SAM-dependent methyltransferase (339 aa)
   
 
  0.852
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
Server load: low (12%) [HD]