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C497_10513 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_10513" - Lysine exporter protein LysE/YggA in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_10513Lysine exporter protein LysE/YggA (215 aa)    
Predicted Functional Partners:
C497_10518
Hypothetical protein (231 aa)
              0.728
C497_07664
Hypothetical protein (501 aa)
   
          0.529
C497_16172
DNA binding protein (217 aa)
   
          0.506
C497_05437
Hypothetical protein (201 aa)
   
          0.485
C497_10523
Threonine synthase (398 aa)
              0.477
C497_10298
Bacterio-opsin activator HTH domain-containing protein (214 aa)
   
          0.476
C497_18122
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions (106 aa)
 
          0.475
C497_07419
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions (109 aa)
 
          0.470
C497_11398
Hypothetical protein (254 aa)
   
          0.439
C497_06042
ABC transport system regulatory protein (340 aa)
   
          0.429
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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