STRINGSTRING
C497_07624 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_07624" - Patched family protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_07624Patched family protein (1103 aa)    
Predicted Functional Partners:
C497_07619
Hypothetical protein (49 aa)
              0.748
C497_07614
Class I and II aminotransferase (373 aa)
              0.632
C497_07629
Hypothetical protein (246 aa)
              0.545
C497_17132
Type 11 methyltransferase (199 aa)
 
          0.512
C497_10433
Bacterio-opsin activator HTH domain-containing protein (216 aa)
 
          0.512
C497_16267
Putative transcriptional regulator (202 aa)
 
          0.510
C497_04417
Bacterio-opsin activator HTH domain-containing protein (216 aa)
 
          0.505
C497_16212
Hypothetical protein (205 aa)
 
          0.494
C497_14422
Sialidase (424 aa)
         
  0.457
C497_17742
Type I phosphodiesterase/nucleotide pyrophosphatase (541 aa)
   
          0.455
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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