STRINGSTRING
C497_07764 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_07764" - Rhomboid family protein/GlpG-like protein in Halalkalicoccus jeotgali
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_07764Rhomboid family protein/GlpG-like protein (311 aa)    
Predicted Functional Partners:
nfi
Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3’ to a deoxyinosine leaving behind the intact lesion on the nicked DNA (244 aa)
 
        0.941
C497_08893
Glutamate synthase (1518 aa)
     
   
  0.757
HacjB3_12550
PHP domain-containing protein (580 aa)
   
        0.751
HacjB3_12555
Hypothetical protein (162 aa)
              0.684
C497_15678
Peptidylprolyl isomerase (180 aa)
 
 
      0.590
C497_13553
Beta-lactamase domain-containing protein (259 aa)
   
      0.546
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (306 aa)
   
      0.546
C497_16127
Hypothetical protein (247 aa)
   
      0.546
C497_17552
Peptidase M50 (409 aa)
   
   
  0.540
C497_10343
Glucokinase (325 aa)
 
          0.536
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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