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secE protein (Halalkalicoccus jeotgali) - STRING interaction network
"secE" - Preprotein translocase Sec61 subunit gamma in Halalkalicoccus jeotgali
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
secEPreprotein translocase Sec61 subunit gamma (57 aa)    
Predicted Functional Partners:
secY
Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (475 aa)
       
 
  0.979
nusG
NusG antitermination factor; Stimulates transcription elongation (145 aa)
 
     
  0.938
C497_07649
Hypothetical protein (166 aa)
   
          0.651
C497_18907
Hypothetical protein (197 aa)
   
          0.651
C497_14482
H/ACA RNA-protein complex component Gar1 (75 aa)
   
          0.650
C497_18712
Hypothetical protein (187 aa)
   
          0.639
eif6
Translation initiation factor eIF-6; Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex (221 aa)
 
     
  0.632
C497_07849
Hypothetical protein (456 aa)
              0.631
nop10
H/ACA RNA-protein complex component Nop10p; Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA (60 aa)
   
          0.612
cetZ
Cell division protein FtsZ; Involved in cell shape control (393 aa)
 
     
  0.599
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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