STRINGSTRING
C497_07959 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_07959" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_07959Hypothetical protein (150 aa)    
Predicted Functional Partners:
C497_13391
Hypothetical protein (77 aa)
   
          0.631
C497_07414
Hypothetical protein (285 aa)
   
          0.614
C497_08079
Hypothetical protein (241 aa)
   
          0.608
C497_14782
Hypothetical protein (208 aa)
   
          0.600
C497_05437
Hypothetical protein (201 aa)
   
          0.600
atpF
V-type ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane (108 aa)
   
          0.577
C497_09083
TrkA-C domain-containing protein (402 aa)
   
          0.570
cetZ
Cell division protein FtsZ; Involved in cell shape control (393 aa)
   
          0.563
C497_11747
Type IV pilus biogenesis complex membrane subunit (669 aa)
 
          0.561
C497_02952
PRC-barrel domain (81 aa)
   
          0.533
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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