STRINGSTRING
nucS protein (Halalkalicoccus jeotgali) - STRING interaction network
"nucS" - Hypothetical protein in Halalkalicoccus jeotgali
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nucSHypothetical protein; Cleaves both 3’ and 5’ ssDNA extremities of branched DNA structures (242 aa)    
Predicted Functional Partners:
C497_08114
Hypothetical protein (142 aa)
              0.718
aubA
Putative ribonuclease of the G/E family protein; Binds to RNA in loop regions with AU-rich sequences (449 aa)
   
          0.631
C497_13186
Inosine-5’-monophosphate dehydrogenase (493 aa)
         
  0.609
C497_14742
Hypothetical protein (138 aa)
   
          0.573
C497_08834
Hypothetical protein (140 aa)
   
          0.568
rpl15
50S ribosomal protein L15P; Binds to the 23S rRNA (173 aa)
   
          0.567
hjc
Holliday junction resolvase; A structure-specific endonuclease that resolves Holliday junction (HJ) intermediates during genetic recombination. Cleaves 4-way DNA junctions introducing paired nicks in opposing strands, leaving a 5’-terminal phosphate and a 3’-terminal hydroxyl group that are ligated to produce recombinant products (160 aa)
   
     
  0.552
C497_03402
Hypothetical protein (285 aa)
   
          0.543
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source (431 aa)
              0.541
C497_08154
Phosphomethylpyrimidine kinase (300 aa)
   
          0.531
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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