STRINGSTRING
C497_08359 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_08359" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_08359Hypothetical protein (185 aa)    
Predicted Functional Partners:
C497_08364
Hypothetical protein (385 aa)
   
   
  0.815
C497_08354
Hypothetical protein (61 aa)
              0.755
C497_08349
Pyruvate kinase (594 aa)
              0.755
C497_08489
Translation initiation factor Sui1 (97 aa)
       
      0.695
C497_14837
Translation initiation factor Sui1 (102 aa)
       
      0.695
C497_08369
Hypothetical protein (203 aa)
              0.565
C497_13553
Beta-lactamase domain-containing protein (259 aa)
   
        0.431
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (306 aa)
   
        0.431
C497_16127
Hypothetical protein (247 aa)
   
        0.431
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
Server load: low (12%) [HD]