STRINGSTRING
C497_08379 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_08379" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_08379Hypothetical protein (78 aa)    
Predicted Functional Partners:
C497_10098
Hypothetical protein (243 aa)
   
          0.652
C497_07949
Transcriptional regulator (59 aa)
   
          0.652
C497_14672
Hypothetical protein (487 aa)
   
          0.652
C497_10123
Hypothetical protein (376 aa)
   
          0.636
C497_15618
Zinc finger SWIM domain-containing protein (116 aa)
   
          0.635
C497_09463
Transcriptional regulator, ArsR like protein (91 aa)
 
          0.633
C497_08644
Hypothetical protein (92 aa)
   
          0.631
C497_15012
Hypothetical protein (150 aa)
   
          0.631
C497_07379
Hypothetical protein (90 aa)
   
          0.626
C497_07354
DNA-directed DNA polymerase type II (894 aa)
   
          0.611
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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