STRINGSTRING
C497_08469 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_08469" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_08469Hypothetical protein (119 aa)    
Predicted Functional Partners:
C497_08474
Hypothetical protein (141 aa)
              0.864
C497_08464
Ribosomal-protein-alanine acetyltransferase (165 aa)
              0.776
C497_08479
NUDIX hydrolase (176 aa)
              0.700
C497_08484
Hypothetical protein (121 aa)
              0.620
C497_08459
ABC transporter periplasmic substrate-binding protein (359 aa)
              0.566
C497_08454
ABC transporter-like protein (530 aa)
              0.566
C497_08449
ABC-type transport system permease (389 aa)
              0.566
C497_08444
ABC-type ribose transport system, permease (351 aa)
              0.566
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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