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C497_08744 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_08744" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_08744Hypothetical protein (339 aa)    
Predicted Functional Partners:
aubA
Putative ribonuclease of the G/E family protein; Binds to RNA in loop regions with AU-rich sequences (449 aa)
 
          0.755
C497_08749
Hypothetical protein (124 aa)
              0.624
C497_02932
Pyruvoyl-dependent arginine decarboxylase (155 aa)
   
          0.475
C497_13578
Hypothetical protein (694 aa)
   
          0.454
C497_16342
Fused rhodanese domain-containing protein/hydrolase (391 aa)
 
          0.444
C497_08849
Disulfide bond formation protein DsbB (133 aa)
 
          0.442
C497_14057
Cobalamin-independent synthase MetE domain-containing protein (329 aa)
   
          0.427
C497_14482
H/ACA RNA-protein complex component Gar1 (75 aa)
   
          0.418
C497_04342
Hypothetical protein (222 aa)
   
          0.416
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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