STRINGSTRING
C497_09143 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_09143" - Protease I in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_09143Protease I (174 aa)    
Predicted Functional Partners:
C497_13186
Inosine-5’-monophosphate dehydrogenase (493 aa)
   
 
  0.764
C497_08893
Glutamate synthase (1518 aa)
     
      0.753
rpl2
50S ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (240 aa)
   
      0.722
rps3
30S ribosomal protein S3P; Binds the lower part of the 30S subunit head (302 aa)
     
      0.708
C497_10963
NADH dehydrogenase-like complex subunit CD (555 aa)
     
    0.702
rpl14
50S ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (132 aa)
     
      0.692
dnaK
Molecular chaperone DnaK; Acts as a chaperone (637 aa)
   
 
  0.690
rps10p
30S ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes (102 aa)
   
      0.685
C497_09133
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (108 aa)
   
      0.685
rpl5
50S ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs (183 aa)
     
      0.650
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
Server load: low (12%) [HD]