STRINGSTRING
C497_09448 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_09448" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_09448Hypothetical protein (133 aa)    
Predicted Functional Partners:
C497_09453
Hypothetical protein (237 aa)
 
          0.857
C497_09458
Beta-lactamase domain-containing protein (248 aa)
              0.709
C497_05167
Hypothetical protein (157 aa)
   
          0.648
C497_17872
Hypothetical protein (137 aa)
   
          0.638
C497_14742
Hypothetical protein (138 aa)
   
          0.630
C497_09463
Transcriptional regulator, ArsR like protein (91 aa)
              0.627
aroK
Shikimate kinase (285 aa)
   
          0.626
rnp3
Ribonuclease P; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5’-ends (233 aa)
   
          0.616
rnp2
Ribonuclease P-like protein; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5’-ends (161 aa)
   
          0.603
C497_09443
Major facilitator superfamily protein (389 aa)
              0.596
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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