STRINGSTRING
C497_09453 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_09453" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_09453Hypothetical protein (237 aa)    
Predicted Functional Partners:
C497_09448
Hypothetical protein (133 aa)
 
          0.857
C497_09458
Beta-lactamase domain-containing protein (248 aa)
              0.835
C497_09463
Transcriptional regulator, ArsR like protein (91 aa)
 
          0.778
C497_17752
Sensory transduction histidine kinase (860 aa)
   
      0.701
C497_05247
Transducer protein htr15 (490 aa)
     
      0.700
C497_09443
Major facilitator superfamily protein (389 aa)
 
          0.690
rpoP
DNA-directed RNA polymerase subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (44 aa)
   
          0.651
C497_15383
Putative RNA-binding protein containing PIN domain-containing protein (126 aa)
 
        0.641
C497_04887
Hypothetical protein (263 aa)
   
          0.641
C497_09838
Hypothetical protein (298 aa)
   
          0.636
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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