STRINGSTRING
C497_10358 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_10358" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_10358Hypothetical protein (159 aa)    
Predicted Functional Partners:
C497_14837
Translation initiation factor Sui1 (102 aa)
   
 
  0.893
C497_08489
Translation initiation factor Sui1 (97 aa)
     
 
  0.870
HacjB3_15125
Hypothetical protein (121 aa)
              0.795
C497_10363
Hypothetical protein (91 aa)
              0.706
tfe
Transcription factor TFIIE subunit alpha; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation [...] (175 aa)
   
 
      0.700
rps28e
30S ribosomal protein S28e (74 aa)
 
      0.649
rps8e
30S ribosomal protein S8e (123 aa)
 
      0.644
C497_14912
Phosphopantetheine adenylyltransferase (162 aa)
   
          0.620
C497_10368
Hypothetical protein (101 aa)
              0.581
C497_09088
Putative DNA-directed RNA polymerase subunit M1 (103 aa)
   
        0.573
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
Server load: low (7%) [HD]