STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_11406sUncharacterized protein. (310 aa)    
Predicted Functional Partners:
FANCM
Fanconi anemia group M protein.
    
 0.826
oxt
Xylosyltransferase oxt.
    
  0.556
DUT
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
    
  0.505
slc25a42
Mitochondrial coenzyme A transporter SLC25A42; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
  0.505
K02A2.6-30
CCHC-type domain-containing protein.
  
     0.502
med23
Mediator of RNA polymerase II transcription subunit 23.
    
  0.492
Lin9
Protein lin-9-like protein.
    
  0.490
SASS6
Spindle assembly abnormal protein 6-like protein.
    
  0.487
obfc1
CST complex subunit STN1.
    
  0.487
RPA2
Replication protein A 32 kDa subunit.
    
  0.487
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.