STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydaCPutative methyltransferase YdaC. (184 aa)    
Predicted Functional Partners:
Eif2s3y
Eukaryotic translation initiation factor 2 subunit 3.
   
 0.750
Tsr1
Pre-rRNA-processing protein TSR1-like protein.
   
  0.716
TRMT112
Multifunctional methyltransferase subunit Uncharacterized protein.
   
 0.709
Ndufaf6
NADH dehydrogenase (Ubiquinone) complex I.
    
 0.706
COQ5
2-methoxy-6-polyprenyl-1.
     
 0.706
MRPS5
28S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 0.704
RpS2
Small subunit ribosomal protein S2e; Belongs to the universal ribosomal protein uS5 family.
    
 0.704
bysl
Bystin.
   
 0.695
rps24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.694
Fzr1
Fizzy-related-like protein.
    
 0.688
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.