STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NapaAlpha-soluble NSF attachment protein. (262 aa)    
Predicted Functional Partners:
Vti1a
Vesicle transport through interaction with t-SNAREs-like protein 1A.
    
 0.996
Nsf2
Vesicle-fusing ATPase 2; Belongs to the AAA ATPase family.
   
 0.993
sec22b
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
   
 0.991
Scfd1
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.990
STX5
Syntaxin-5; Belongs to the syntaxin family.
    
 0.989
Stx6
Syntaxin-6.
    
 0.988
YKT6
Synaptobrevin-like protein YKT6; Belongs to the synaptobrevin family.
    
 0.987
STX16
Syntaxin-16; Belongs to the syntaxin family.
    
 0.986
CSKR_4372s
t-SNARE coiled-coil homology domain-containing protein.
    
 0.985
Stx7
Syntaxin-7.
    
 0.967
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.