STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N-2Neurogenic locus Notch protein. (558 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.878
unc-89
Muscle M-line assembly protein unc-89.
   
 0.756
unc-89-2
Muscle M-line assembly protein unc-89.
   
 0.756
CSKR_11071s
Uncharacterized protein.
   
 0.756
Ptk7
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.701
mib1-2
E3 ubiquitin-protein ligase mind-bomb.
   
 0.693
Mylk3
Myosin light chain kinase 3.
    
 0.647
tonsl
Tonsoku-like protein.
   
 0.647
Frem1
FRAS1-related extracellular matrix protein 1.
    
 0.638
CTTNBP2
Cortactin-binding protein 2.
   
 0.596
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.