STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CtBPC-terminal-binding protein. (627 aa)    
Predicted Functional Partners:
Psat1
Phosphoserine aminotransferase.
  
 0.987
HDAC2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.967
Su(H)
Suppressor of hairless protein.
    
 0.955
Tcf7
Transcription factor 7.
    
 0.937
pan-2
Protein pangolin.
    
 0.933
AMT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.910
Fpgs
Folylpolyglutamate synthase.
    
 0.875
KDM1A
Lysine-specific histone demethylase 1A.
    
 0.871
GLDC
Glycine dehydrogenase (Decarboxylating).
  
 
 0.861
hdac3
Histone deacetylase 3.
    
 0.858
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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