STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103033920Insulin-like growth factor binding protein 1a. (257 aa)    
Predicted Functional Partners:
LOC103024122
Insulin-like growth factor 2b.
   
 0.840
W5LP43_ASTMX
Matrix metallopeptidase 14b (membrane-inserted).
    
 0.757
igf1
Insulin-like growth factor 1.
     
 0.751
ENSAMXP00000032803
Myristoylated alanine-rich protein kinase C substrate b.
      
 0.679
ENSAMXP00000034094
Insulin-like growth factor 2a.
   
 0.649
igfbp7
Insulin-like growth factor binding protein 7.
      
 0.502
igfals
Insulin-like growth factor binding protein, acid labile subunit.
   
 0.497
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 
 0.461
W5LRN3_ASTMX
LRRNT domain-containing protein.
   
 0.432
hif1a
Hypoxia inducible factor 1 subunit alpha a.
      
 0.410
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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