STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103041886Cellular communication network factor 2b. (348 aa)    
Predicted Functional Partners:
ccn2
Cellular communication network factor 2a.
  
  
 
0.902
dcn
Decorin; May affect the rate of fibrils formation.
      
 0.567
ENSAMXP00000047894
Endothelin 1.
      
 0.432
tgfb1
Transforming growth factor beta; Belongs to the TGF-beta family.
   
  
 0.420
LOC103024607
Transforming growth factor beta; Belongs to the TGF-beta family.
   
  
 0.420
LOC103021920
JunE proto-oncogene, AP-1 transcription factor subunit.
   
  
 0.414
LOC103031445
Thrombospondin 1b.
    
 
 0.412
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.