STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpar2Lysophosphatidic acid receptor 2a; Belongs to the G-protein coupled receptor 1 family. (349 aa)    
Predicted Functional Partners:
LOC103022306
Guanine nucleotide binding protein (G protein), alpha 13a.
    
 0.928
gna12
Guanine nucleotide binding protein (G protein) alpha 12a.
    
 0.928
ENSAMXP00000042082
Guanine nucleotide binding protein (G protein), alpha 13b.
    
 0.928
LOC111191807
Guanine nucleotide binding protein (G protein), alpha 14.
    
 0.624
LOC103045065
Lysophosphatidic acid receptor 1; Belongs to the G-protein coupled receptor 1 family.
  
  
0.589
W5LRK5_ASTMX
G_PROTEIN_RECEP_F1_2 domain-containing protein.
     
0.584
LOC103045202
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.559
LOC103033252
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.559
LOC103042808
Uncharacterized protein.
    
 0.559
LOC103037614
Transmembrane protein 169a.
      
 0.548
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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