STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Papd5Terminal nucleotidyltransferase 4B. (667 aa)    
Predicted Functional Partners:
TENT4A
Terminal nucleotidyltransferase 4A.
  
  
 
0.903
tent4a
Terminal nucleotidyltransferase 4A.
  
  
 
0.902
Zcchc7
Uncharacterized protein.
   
 
 0.814
mtrex
Mtr4 exosome RNA helicase.
   
 
 0.773
exosc10
Exosome component 10.
   
 
 0.739
cnot9
CCR4-NOT transcription complex subunit 9.
    
   0.698
Zcchc14
Zinc finger, CCHC domain containing 14.
   
 
 0.672
skiv2l
SKI2 homolog, superkiller viralicidic activity 2-like.
   
 
 0.595
Znfx1
Zinc finger, NFX1-type containing 1.
    
 
 0.588
papolg
Poly(A) polymerase gamma.
    
 
 0.567
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.