STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060W0U8Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (361 aa)    
Predicted Functional Partners:
A0A061A9P5
Uncharacterized protein.
  
  
  0.565
A0A060XSK0
Uncharacterized protein.
  
     0.522
A0A060VTN8
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.475
A0A060VVS1
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.475
A0A060VXS7
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.475
A0A060W4X2
t-SNARE coiled-coil homology domain-containing protein.
    
 0.475
A0A060W5Q8
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.475
A0A060WB68
SynN domain-containing protein.
    
 0.475
A0A060WBA3
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.475
A0A060WH33
t-SNARE coiled-coil homology domain-containing protein.
    
 0.475
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.