STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060W9H9Uncharacterized protein. (223 aa)    
Predicted Functional Partners:
A0A060XP17
Uncharacterized protein.
    
 0.869
A0A060WY77
RabGGT_insert domain-containing protein.
     
 0.780
A0A060WLV7
Uncharacterized protein.
  
  
0.751
A0A060WKD6
Tetraspanin.
     
 0.750
CD63
Tetraspanin.
     
 0.750
A0A060VSU5
Uncharacterized protein.
  
  
0.744
A0A060WDK8
Uncharacterized protein.
  
  
0.743
A0A060Y9D5
Uncharacterized protein.
     
0.731
A0A060YCS1
Uncharacterized protein.
     
 0.731
A0A060YDC9
Uncharacterized protein.
     
0.731
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.