STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060WBC5MFS domain-containing protein. (450 aa)    
Predicted Functional Partners:
A0A060X1I0
Uncharacterized protein.
   
 0.795
A0A060W883
Uncharacterized protein.
    
 0.658
A0A060XUD9
Uncharacterized protein.
    
 0.658
A0A060Z2Z1
TPR_REGION domain-containing protein.
    
 
 0.609
A0A060WQY5
Tau95 domain-containing protein.
    
 
 0.547
A0A060WVA0
Uncharacterized protein.
    
 
 0.547
A0A060W5D8
Uncharacterized protein.
    
  0.540
A0A060XT74
MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
    
 
 0.437
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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