STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060X355Uncharacterized protein. (410 aa)    
Predicted Functional Partners:
A0A060W6I6
SCP2 domain-containing protein.
    
 0.848
A0A060XBW3
SCP2 domain-containing protein.
    
 0.848
A0A060YU16
Thiolase_N domain-containing protein.
    
 0.848
A0A060Z5H7
Uncharacterized protein.
  
 
 0.664
A0A060YP76
Abhydrolase_2 domain-containing protein.
    
 0.658
A0A060X1J6
Uncharacterized protein.
   
 
 0.655
A0A060X2I1
Uncharacterized protein.
   
 
 0.655
A0A060X816
Uncharacterized protein.
   
 
 0.655
A0A060XFS1
Uncharacterized protein.
   
 
 0.655
A0A060XXJ7
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 
 0.655
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.