STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060X3M3Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (712 aa)    
Predicted Functional Partners:
A0A060VSQ2
ACB domain-containing protein.
  
 0.983
A0A060VW78
ACB domain-containing protein.
  
 0.983
A0A060YL10
Uncharacterized protein.
  
 0.983
A0A060WFG6
ETF domain-containing protein.
  
 0.980
A0A060WTZ9
ETF domain-containing protein.
  
 0.980
A0A060Z0X4
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.979
A0A060Z6A1
Thiolase_N domain-containing protein.
  
 0.979
A0A060ZG54
Thiolase_C domain-containing protein.
  
 0.979
A0A060XAB5
Uncharacterized protein.
  
 0.977
A0A060W6I6
SCP2 domain-containing protein.
  
 0.971
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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