STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060X7U8MHD1 domain-containing protein. (711 aa)    
Predicted Functional Partners:
A0A060X0Q4
PH domain-containing protein.
  
     0.521
A0A060W3F2
PH domain-containing protein.
  
     0.511
A0A060W7H1
PH domain-containing protein.
  
     0.511
A0A060X6T2
PH domain-containing protein.
  
     0.502
A0A060XZV8
Uncharacterized protein.
  
     0.497
A0A060XAT6
Uncharacterized protein.
  
     0.442
A0A060W340
Uncharacterized protein.
      
 0.410
A0A060XE83
Uncharacterized protein.
      
 0.410
A0A060YVC9
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
  
 0.404
A0A060XYJ7
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
      
 0.402
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.