STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060X9S7IRF tryptophan pentad repeat domain-containing protein. (431 aa)    
Predicted Functional Partners:
A0A060VR42
Signal transducer and activator of transcription.
   
 0.933
A0A060VR90
Signal transducer and activator of transcription.
   
 0.933
A0A060VSA0
Signal transducer and activator of transcription.
   
 0.933
A0A060WFW0
Signal transducer and activator of transcription.
   
 0.930
A0A060WNM9
Signal transducer and activator of transcription.
   
 0.928
A0A060X5R1
SH2 domain-containing protein.
   
 0.892
A0A060XCB1
STAT_int domain-containing protein.
   
 0.892
A0A060X4D5
STAT_int domain-containing protein.
   
 0.884
A0A060XAX5
SH2 domain-containing protein.
   
 0.884
A0A060XM77
Signal transducer and activator of transcription.
   
 0.884
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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