STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XHY4Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. (301 aa)    
Predicted Functional Partners:
A0A060WRI7
Uncharacterized protein.
    
   0.735
A0A060WZP2
Uncharacterized protein.
    
   0.735
A0A060X0A4
Uncharacterized protein.
    
   0.735
A0A060YE67
Uncharacterized protein.
   
    0.597
A0A060XMT4
Uncharacterized protein.
   
  
 0.545
A0A060WK46
Uncharacterized protein.
   
  
 0.539
A0A060WHC6
CBF domain-containing protein.
   
    0.533
A0A060XI18
Uncharacterized protein.
   
    0.524
A0A060XS67
Uncharacterized protein.
   
    0.524
A0A060VNU6
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
    0.509
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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