STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XP67Uncharacterized protein. (457 aa)    
Predicted Functional Partners:
A0A060VXK3
Uncharacterized protein.
   
 0.807
RHOF
Rho-related GTP-binding protein RhoF.
   
 0.807
A0A060WFV3
Uncharacterized protein.
   
 0.806
A0A060WHY6
Uncharacterized protein.
   
 0.806
A0A060XLK7
Uncharacterized protein.
   
 0.806
A0A060Y7H0
Uncharacterized protein.
   
 0.806
A0A060ZA77
Uncharacterized protein.
   
 0.806
A0A060VUD4
Uncharacterized protein.
   
 0.805
A0A060WR88
Uncharacterized protein.
   
 0.805
A0A060WXY2
Uncharacterized protein.
   
 0.805
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.