STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XS17AIG1-type G domain-containing protein. (599 aa)    
Predicted Functional Partners:
A0A060ZK27
IL6Ra-bind domain-containing protein.
   
 0.952
A0A060Z5S7
Uncharacterized protein.
    
 0.922
A0A060VZW3
Uncharacterized protein.
    
 0.909
A0A060XA42
Uncharacterized protein.
   
 0.909
A0A060XDF6
Uncharacterized protein.
    
 0.909
A0A060Y2L7
Uncharacterized protein.
   
 0.909
A0A060YJ74
Uncharacterized protein.
   
 0.909
A0A060YUY8
Uncharacterized protein.
    
 0.897
A0A060VVC3
Uncharacterized protein.
     
 0.894
A0A060ZHR6
Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.890
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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