STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XTN0Uncharacterized protein. (91 aa)    
Predicted Functional Partners:
A0A060WHZ1
Uncharacterized protein.
      
 0.505
A0A060WBS9
MFS domain-containing protein.
      
 0.493
A0A060Y2N1
MFS domain-containing protein.
      
 0.452
A0A060X8G2
Uncharacterized protein.
      
 0.451
A0A060YYQ8
RabBD domain-containing protein.
      
 0.451
A0A060YZ04
C2 domain-containing protein.
      
 0.451
A0A060XWE7
MFS domain-containing protein.
      
 0.450
A0A060Y4D6
Uncharacterized protein; Belongs to the peptidase S1 family.
      
 0.420
A0A060W9F1
Uncharacterized protein.
      
 0.418
A0A060XFA9
Uncharacterized protein.
      
 0.418
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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