STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XXW1Uncharacterized protein. (60 aa)    
Predicted Functional Partners:
A0A060YX66
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.678
A0A060XNY4
Uncharacterized protein.
   
 0.657
A0A060Y3A9
Uncharacterized protein.
   
 0.657
A0A060VZU2
Uncharacterized protein.
   
 0.632
A0A060XFW7
Uncharacterized protein.
   
 0.632
A0A060VSQ2
ACB domain-containing protein.
   
  0.609
A0A060VW78
ACB domain-containing protein.
   
  0.609
A0A060W026
Uncharacterized protein.
    
 0.607
A0A060WPL9
Uncharacterized protein.
   
  0.603
A0A060WQ94
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
  0.603
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.