A0A060Y190 protein (Oncorhynchus mykiss) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A060Y190

Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (288 aa)

Predicted Functional Partners:

A0A060Y8I6

0.504

A0A060YL76

0.504

A0A060Z3E2

0.504

A0A060W4M7

0.485

A0A060XVR2

0.485

A0A060VZQ3

0.464

A0A060XZA3

0.464

A0A060Y5V9

0.453

A0A060YI86

0.453

A0A060WSN6

0.450

Your Current Organism:

Oncorhynchus mykiss

NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A060VZQ3	A0A060Y190	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.464
A0A060W4M7	A0A060XVR2	AA_permease domain-containing protein.	Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.	0.509
A0A060W4M7	A0A060Y190	AA_permease domain-containing protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.485
A0A060WSN6	A0A060Y190	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.450
A0A060XVR2	A0A060W4M7	Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.	AA_permease domain-containing protein.	0.509
A0A060XVR2	A0A060Y190	Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.485
A0A060XZA3	A0A060Y190	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.464
A0A060Y190	A0A060VZQ3	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.464
A0A060Y190	A0A060W4M7	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	AA_permease domain-containing protein.	0.485
A0A060Y190	A0A060WSN6	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.450
A0A060Y190	A0A060XVR2	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.	0.485
A0A060Y190	A0A060XZA3	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.464
A0A060Y190	A0A060Y5V9	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	MoCF_biosynth domain-containing protein.	0.453
A0A060Y190	A0A060Y8I6	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.504
A0A060Y190	A0A060YI86	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	MoCF_biosynth domain-containing protein.	0.453
A0A060Y190	A0A060YL76	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the BolA/IbaG family.	0.504
A0A060Y190	A0A060Z3E2	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.504
A0A060Y5V9	A0A060Y190	MoCF_biosynth domain-containing protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.453
A0A060Y5V9	A0A060Y8I6	MoCF_biosynth domain-containing protein.	Uncharacterized protein.	0.452
A0A060Y5V9	A0A060Z3E2	MoCF_biosynth domain-containing protein.	Uncharacterized protein.	0.452