STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060Y2S1Homeobox domain-containing protein. (247 aa)    
Predicted Functional Partners:
A0A060XND4
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
   
 
0.908
A0A060Y3C9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
   
 
0.908
A0A060WEV0
Homeobox domain-containing protein.
  
  
0.905
A0A060X3J1
Homeobox domain-containing protein.
  
  
0.905
A0A060XXG4
Homeobox domain-containing protein.
   
  
0.902
A0A060W481
Homeobox domain-containing protein.
   
  
0.842
A0A060WJY6
Homeobox domain-containing protein.
   
  
0.842
A0A060X348
Homeobox domain-containing protein.
   
  
0.842
A0A060X4Q3
Homeobox domain-containing protein.
   
 
0.833
A0A060XVH4
Homeobox domain-containing protein.
   
 
0.833
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.