STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YGD5Ras-associating domain-containing protein. (444 aa)    
Predicted Functional Partners:
A0A061A4H1
Uncharacterized protein.
      
 0.450
A0A060VWC8
FERM domain-containing protein.
    
 
 0.443
A0A060VXW4
Uncharacterized protein.
    
 
 0.443
A0A060W233
FERM domain-containing protein.
    
 
 0.443
A0A061A2Y9
FERM domain-containing protein.
    
 
 0.443
A0A061A6N3
FERM_C domain-containing protein.
    
 
 0.443
A0A060VRW8
Uncharacterized protein.
    
 
 0.433
A0A060VXS5
Interfer-bind domain-containing protein.
    
 
 0.433
A0A060VXY9
Fibronectin type-III domain-containing protein.
    
 
 0.433
A0A060W122
Uncharacterized protein.
    
 
 0.433
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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