STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YNB8Uncharacterized protein. (561 aa)    
Predicted Functional Partners:
A0A060XNA5
Uncharacterized protein.
     
 0.952
A0A060YKK6
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
     
 0.913
A0A060VYW9
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.905
A0A060WKC7
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.905
A0A060W7T9
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
  
 
 0.902
A0A060WFK8
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.902
A0A060XAB1
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.902
A0A060Y5G9
Uncharacterized protein.
  
 
 0.902
A0A060Y5Z5
Uncharacterized protein.
  
 
 0.902
A0A060Y6M0
Ligase_CoA domain-containing protein.
  
 
 0.902
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.