STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YT10Aldo_ket_red domain-containing protein. (152 aa)    
Predicted Functional Partners:
A0A060YJN5
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.897
A0A060Z5V5
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.889
A0A060WHJ9
Uncharacterized protein.
   
 0.873
A0A060X0R2
Uncharacterized protein.
   
 0.873
A0A060WR13
Choline dehydrogenase.
    
 0.859
A0A060WQW5
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). Belongs to the metallo-dependent hydrolases superfamily.
  
 
  0.843
A0A060YBP6
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.837
A0A060YCD9
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.837
A0A060WGA7
Uncharacterized protein.
    
 0.835
A0A060WN90
Peptidase S59 domain-containing protein.
    
 0.835
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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