STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060Z4Z3Uncharacterized protein. (209 aa)    
Predicted Functional Partners:
A0A060VVR7
Uncharacterized protein.
  
 
 0.991
A0A060W5R7
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
  
 
 0.991
A0A060WBI4
TRASH domain-containing protein.
   
 
 0.989
A0A060XNW6
TRASH domain-containing protein.
   
 
 0.989
ZN593
Zinc finger protein 593.
   
 
 0.982
A0A060WFH5
Uncharacterized protein.
   
 
 0.980
A0A060WFW9
C2H2-type domain-containing protein.
   
 
 0.980
A0A060VSV1
Uncharacterized protein.
   
 
 0.973
A0A060VSX7
G domain-containing protein.
   
 
 0.973
A0A060WBL5
CP-type G domain-containing protein.
   
 
 0.973
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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