STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000000057Chromosome 17 open reading frame 75. (365 aa)    
Predicted Functional Partners:
LOC115152866
Vacuolar protein-sorting-associated protein 25-like.
   
 0.988
ENSSTUP00000039720
Vacuolar protein sorting 36 homolog.
    
 0.984
SNF8
SNF8 subunit of ESCRT-II.
    
 0.976
snf8
SNF8 subunit of ESCRT-II.
    
 0.976
LOC115201031
Charged multivesicular body protein 2a.
   
 0.948
LOC115158731
Charged multivesicular body protein 2a-like.
   
 0.948
ENSSTUP00000007493
Charged multivesicular body protein 3.
    
 0.943
chmp3
Charged multivesicular body protein 3.
    
 0.943
wdr11
WD repeat domain 11.
    
 
 0.936
LOC115190951
Protein FAM91A1.
    
 
 0.921
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.