STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115148393Uncharacterized LOC115148393. (650 aa)    
Predicted Functional Partners:
ENSSTUP00000014610
Exosome component 5.
    
 0.996
ENSSTUP00000084555
Exosome component 8.
    
 0.996
exosc3
Exosome component 3.
    
 0.995
exosc4
Exosome component 4.
    
 0.995
ENSSTUP00000010373
Exosome component 1.
    
 0.986
ENSSTUP00000074032
annotation not available
    
 0.986
ENSSTUP00000095799
Exosome component 1.
    
 0.986
exosc7
Exosome component 7.
    
 0.986
LOC115182607
Exosome complex component RRP45-like.
   
 0.984
ENSSTUP00000074757
annotation not available
   
 0.984
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.